Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitinyl-coa dehydratase | D9K54_16075 | Not Available | Negative | 3215108 - 3215893 | 28191.8 |
| atp-dependent acyl-coa ligase | D9K54_16080 | Not Available | Negative | 3216002 - 3217555 | 58520.3 |
| l-carnitine coa-transferase | D9K54_16085 | Not Available | Negative | 3217629 - 3218846 | 45071.2 |
| crotonobetainyl-coa dehydrogenase | D9K54_16090 | Not Available | Negative | 3218975 - 3220117 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | D9K54_16095 | Not Available | Negative | 3220148 - 3221662 | 56590.4 |
| protein fixa | D9K54_16100 | Not Available | Positive | 3222135 - 3222905 | 27145.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | D9K54_16105 | Not Available | Positive | 3222920 - 3223861 | 33471.0 |
| fad-dependent oxidoreductase | D9K54_16110 | Not Available | Positive | 3223912 - 3225198 | 45731.6 |
| ferredoxin-like protein fixx | D9K54_16115 | Not Available | Positive | 3225195 - 3225482 | 10479.5 |
| mfs transporter | D9K54_16120 | Not Available | Positive | 3225540 - 3226871 | 48669.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





