Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxide stress protein yaaa | D9K54_15925 | Not Available | Negative | 3181016 - 3181792 | 29601.5 |
| sodium:alanine symporter family protein | D9K54_15930 | Not Available | Negative | 3181862 - 3183292 | 51676.9 |
| transaldolase 1 | D9K54_15935 | Not Available | Positive | 3183571 - 3184524 | 35221.2 |
| molybdopterin adenylyltransferase | D9K54_15940 | Not Available | Positive | 3184639 - 3185226 | 21223.6 |
| succinate-acetate/proton symporter satp | D9K54_15945 | Not Available | Negative | 3185261 - 3185827 | 20072.2 |
| acidic protein msyb | D9K54_15950 | Not Available | Negative | 3185976 - 3186689 | 26666.5 |
| duf2541 family protein | D9K54_15955 | Not Available | Negative | 3186715 - 3187119 | 14510.4 |
| molecular chaperone dnak | D9K54_15960 | Not Available | Positive | 3187496 - 3189412 | 69118.9 |
| molecular chaperone dnaj | D9K54_15965 | Not Available | Positive | 3189501 - 3190631 | 41046.7 |
| type i toxin-antitoxin system hok family toxin | D9K54_15970 | Not Available | Negative | 3190735 - 3190944 | 7742.74 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





