Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjjw family glycine radical enzyme activase | D9K54_15775 | Not Available | Negative | 3149482 - 3150345 | 31479.3 |
| yjji family glycine radical enzyme | D9K54_15780 | Not Available | Negative | 3150317 - 3151867 | 58023.3 |
| deoxyribose-phosphate aldolase | D9K54_15785 | Not Available | Positive | 3152125 - 3152904 | 27735.3 |
| thymidine phosphorylase | D9K54_15790 | Not Available | Positive | 3153031 - 3154353 | 47182.9 |
| phosphopentomutase | D9K54_15795 | Not Available | Positive | 3154405 - 3155628 | 44372.4 |
| purine-nucleoside phosphorylase | D9K54_15800 | Not Available | Positive | 3155685 - 3156404 | 25951.4 |
| xre family transcriptional regulator | D9K54_15805 | Not Available | Negative | 3156488 - 3156751 | 10042.5 |
| lipoate--protein ligase a | D9K54_15810 | Not Available | Negative | 3156783 - 3157799 | 37899.9 |
| protein smp | D9K54_15815 | Not Available | Negative | 3157827 - 3158471 | 24084.2 |
| phosphoserine phosphatase | D9K54_15820 | Not Available | Positive | 3158577 - 3159545 | 35044.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





