Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2075 domain-containing protein | D9K54_15620 | Not Available | Negative | 3120012 - 3121862 | 70733.5 |
| gtpase | D9K54_15625 | Not Available | Negative | 3122186 - 3123142 | 35694.9 |
| ybdd/yjix family protein | D9K54_15630 | Not Available | Negative | 3123153 - 3123356 | 7729.24 |
| carbon starvation protein a | D9K54_15635 | Not Available | Negative | 3123406 - 3125556 | 77314.5 |
| methyl-accepting chemotaxis protein | D9K54_15645 | Not Available | Positive | 3126619 - 3128283 | 59884.0 |
| l-galactonate transporter | D9K54_15650 | Not Available | Negative | 3128332 - 3129693 | 49429.4 |
| gntr family transcriptional regulator | D9K54_15655 | Not Available | Negative | 3129908 - 3130822 | 35390.2 |
| zinc-binding alcohol dehydrogenase family protein | D9K54_15660 | Not Available | Positive | 3130961 - 3131983 | 36436.0 |
| phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | D9K54_15665 | Not Available | Negative | 3132122 - 3134413 | 85528.7 |
| duf2501 domain-containing protein | D9K54_15670 | Not Available | Negative | 3134667 - 3135161 | 17381.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





