Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | D9K54_15405 | Not Available | Negative | 3073118 - 3074098 | 36780.8 |
| yjht family mutarotase | D9K54_15410 | Not Available | Negative | 3074162 - 3075268 | 39602.3 |
| n-acetylneuraminic acid outer membrane channel protein nanc | D9K54_15415 | Not Available | Negative | 3075288 - 3076004 | 27889.4 |
| type 1 fimbriae regulatory protein fimb | D9K54_15420 | Not Available | Positive | 3077460 - 3078062 | 22994.8 |
| type 1 fimbriae regulatory protein fime | D9K54_15425 | Not Available | Positive | 3078540 - 3079136 | 23117.6 |
| type-1 fimbrial protein subunit a | D9K54_15430 | Not Available | Positive | 3079617 - 3080165 | 18197.3 |
| type 1 fimbrial protein | D9K54_15435 | Not Available | Positive | 3080230 - 3080769 | 19402.4 |
| molecular chaperone fimc | D9K54_15440 | Not Available | Positive | 3080806 - 3081531 | 26669.5 |
| fimbrial biogenesis outer membrane usher protein | D9K54_15445 | Not Available | Positive | 3081598 - 3084234 | 96423.7 |
| protein fimf | D9K54_15450 | Not Available | Positive | 3084244 - 3084774 | 18746.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





