Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inovirus gp2 family protein | D9K54_15295 | Not Available | Negative | 3050901 - 3051632 | 27708.2 |
| hypothetical protein | D9K54_15300 | Not Available | Negative | 3053113 - 3054243 | 44639.5 |
| gtpase | D9K54_15305 | Not Available | Positive | 3054428 - 3055312 | 33148.0 |
| wyl domain-containing protein | D9K54_15310 | Not Available | Positive | 3055515 - 3056195 | 26109.8 |
| hypothetical protein | D9K54_15315 | Not Available | Positive | 3056343 - 3057020 | 24329.0 |
| duf905 domain-containing protein | D9K54_15320 | Not Available | Positive | 3057050 - 3057259 | 7951.34 |
| duf945 domain-containing protein | D9K54_15325 | Not Available | Positive | 3057349 - 3058167 | 31203.5 |
| antirestriction protein | D9K54_15330 | Not Available | Positive | 3058259 - 3058744 | 18129.3 |
| dna repair protein radc | D9K54_15335 | Not Available | Positive | 3058759 - 3059235 | 17657.3 |
| duf987 domain-containing protein | D9K54_15340 | Not Available | Positive | 3059322 - 3059543 | 8455.26 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





