Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit i | D9K54_15200 | Not Available | Positive | 3035710 - 3036060 | 12649.3 |
| is1 family transposase | D9K54_15205 | Not Available | Positive | 3036180 - 3036297 | 4500.51 |
| glycerophosphodiester phosphodiesterase | D9K54_15210 | Not Available | Negative | 3036415 - 3037758 | 49245.3 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | D9K54_15220 | Not Available | Negative | 3039253 - 3040569 | 48473.3 |
| hypothetical protein | D9K54_15240 | Not Available | Negative | 3043170 - 3043718 | 20543.7 |
| alpa family transcriptional regulator | D9K54_15250 | Not Available | Negative | 3044001 - 3044234 | 8998.71 |
| hypothetical protein | D9K54_15255 | Not Available | Negative | 3044303 - 3044875 | 22100.3 |
| inovirus gp2 family protein | D9K54_15260 | Not Available | Negative | 3045123 - 3045689 | 22543.8 |
| h-ns histone family protein | D9K54_15275 | Not Available | Negative | 3047498 - 3047938 | 16589.4 |
| duf3644 domain-containing protein | D9K54_15290 | Not Available | Negative | 3049695 - 3050573 | 33794.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





