Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose import atp-binding protein rbsa | D9K54_15150 | Not Available | Negative | 3022867 - 3024372 | 55045.0 |
| d-ribose pyranase | D9K54_15155 | Not Available | Negative | 3024380 - 3024799 | 15284.4 |
| low affinity potassium transport system protein kup | D9K54_15160 | Not Available | Negative | 3024966 - 3026834 | 69298.3 |
| atpase rava | D9K54_15165 | Not Available | Positive | 3027057 - 3028553 | 56438.1 |
| atpase rava stimulator viaa | D9K54_15170 | Not Available | Positive | 3028547 - 3029998 | 55909.6 |
| asparagine synthetase a | D9K54_15175 | Not Available | Negative | 3030003 - 3030995 | 36651.6 |
| asnc family transcriptional regulator | D9K54_15180 | Not Available | Positive | 3031147 - 3031605 | 16888.7 |
| fmn-binding protein mioc | D9K54_15185 | Not Available | Positive | 3031695 - 3032138 | 15812.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | D9K54_15190 | Not Available | Positive | 3032517 - 3034406 | 69525.4 |
| ribosomal rna small subunit methyltransferase g | D9K54_15195 | Not Available | Positive | 3034470 - 3035093 | 23432.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





