Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4-like element isec29 family transposase | D9K54_15090 | Not Available | Negative | 3012468 - 3013652 | 44637.1 |
| hypothetical protein | D9K54_15095 | Not Available | Positive | 3013701 - 3013886 | 7073.67 |
| hypothetical protein | D9K54_15100 | Not Available | Positive | 3014106 - 3014387 | 10454.4 |
| arma family 16s rrna (guanine(1405)-n(7))-methyltransferase | D9K54_15105 | Not Available | Negative | 3014368 - 3015141 | 30162.3 |
| fadr family transcriptional regulator | D9K54_15120 | Not Available | Positive | 3016823 - 3017515 | 26063.5 |
| dha2 family efflux mfs transporter permease subunit | D9K54_15125 | Not Available | Positive | 3017538 - 3018965 | 51445.9 |
| ribose operon repressor | D9K54_15130 | Not Available | Negative | 3018931 - 3019923 | 36614.1 |
| ribokinase | D9K54_15135 | Not Available | Negative | 3019927 - 3020856 | 32307.4 |
| ribose abc transporter substrate-binding protein rbsb | D9K54_15140 | Not Available | Negative | 3020982 - 3021872 | 30940.2 |
| ribose abc transporter permease | D9K54_15145 | Not Available | Negative | 3021897 - 3022862 | 33454.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





