Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | D9K54_15030 | Not Available | Positive | 3002968 - 3003579 | 22831.2 |
| hypothetical protein | D9K54_15035 | Not Available | Positive | 3003576 - 3003767 | 6793.1 |
| udp-glucose 6-dehydrogenase | D9K54_15045 | Not Available | Negative | 3004801 - 3005967 | 43643.2 |
| nadp-dependent phosphogluconate dehydrogenase | D9K54_15050 | Not Available | Negative | 3006216 - 3007622 | 51444.1 |
| udp-glucose 4-epimerase gale | D9K54_15055 | Not Available | Negative | 3007742 - 3008761 | 37946.1 |
| glycosyltransferase family 1 protein | D9K54_15060 | Not Available | Negative | 3008792 - 3009910 | 41879.6 |
| glycosyltransferase | D9K54_15065 | Not Available | Negative | 3010094 - 3010864 | 29525.8 |
| is1 family transposase | D9K54_15075 | Not Available | Negative | 3011188 - 3011303 | 4387.34 |
| trimethoprim-resistant dihydrofolate reductase dfra17 | D9K54_15080 | Not Available | Positive | 3011451 - 3011924 | 17560.2 |
| is6 family transposase | D9K54_15085 | Not Available | Positive | 3011998 - 3012066 | 2965.68 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





