Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | D9K54_14930 | Not Available | Negative | 2985886 - 2986944 | 39956.7 |
| dna gyrase inhibitor sbmc | D9K54_14935 | Not Available | Negative | 2987142 - 2987615 | 18062.3 |
| serine-type d-ala-d-ala carboxypeptidase dacd | D9K54_14940 | Not Available | Negative | 2987734 - 2988900 | 43390.6 |
| exodeoxyribonuclease i | D9K54_14945 | Not Available | Positive | 2989109 - 2990536 | 54488.6 |
| hypothetical protein | D9K54_14950 | Not Available | Negative | 2990579 - 2990806 | 8092.61 |
| yeee/yede family protein | D9K54_14955 | Not Available | Negative | 2990820 - 2991878 | 38042.6 |
| low-affinity putrescine importer plap | D9K54_14960 | Not Available | Negative | 2992057 - 2993415 | 49540.5 |
| membrane protein yoei | D9K54_14965 | Not Available | Negative | 2993405 - 2993467 | 2241.66 |
| lysr family transcriptional regulator | D9K54_14970 | Not Available | Negative | 2993682 - 2994611 | 34205.0 |
| nad(p)-dependent oxidoreductase | D9K54_14975 | Not Available | Negative | 2994657 - 2995481 | 29711.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





