Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_14865 | Not Available | Positive | 2980603 - 2981013 | 15097.3 |
| duf945 domain-containing protein | D9K54_14875 | Not Available | Positive | 2981234 - 2982055 | 31273.5 |
| antirestriction protein | D9K54_14880 | Not Available | Positive | 2982137 - 2982616 | 18154.4 |
| dna repair protein radc | D9K54_14885 | Not Available | Positive | 2982632 - 2983108 | 17689.4 |
| duf987 domain-containing protein | D9K54_14890 | Not Available | Positive | 2983171 - 2983392 | 8383.14 |
| type iv toxin-antitoxin system yeeu family antitoxin | D9K54_14895 | Not Available | Positive | 2983466 - 2983834 | 13626.3 |
| hypothetical protein | D9K54_14905 | Not Available | Positive | 2984293 - 2984487 | 6959.16 |
| duf957 domain-containing protein | D9K54_14910 | Not Available | Positive | 2984500 - 2984613 | 4241.28 |
| ethanolamine utilization protein | D9K54_14920 | Not Available | Positive | 2985102 - 2985284 | 6419.74 |
| duf496 family protein | D9K54_14925 | Not Available | Negative | 2985385 - 2985714 | 12778.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





