Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin acetylase trax | D9K54_14760 | Not Available | Positive | 2964863 - 2965609 | 27759.0 |
| alpha/beta hydrolase | D9K54_14765 | Not Available | Positive | 2965668 - 2966528 | 31679.1 |
| fertility inhibition protein fino | D9K54_14770 | Not Available | Positive | 2966631 - 2967191 | 21052.6 |
| anr family transcriptional regulator | D9K54_14775 | Not Available | Positive | 2967327 - 2967539 | 8272.87 |
| hypothetical protein | D9K54_14780 | Not Available | Negative | 2967955 - 2968164 | 7374.69 |
| type i toxin-antitoxin system hok family toxin | D9K54_14785 | Not Available | Positive | 2968220 - 2968369 | 5543.0 |
| replication regulatory protein repa | D9K54_14790 | Not Available | Positive | 2968653 - 2968910 | 9595.37 |
| replication protein repa | D9K54_14795 | Not Available | Negative | 2968932 - 2969063 | 4818.73 |
| repa leader peptide tap | D9K54_14800 | Not Available | Positive | 2969142 - 2969216 | 2588.29 |
| hypothetical protein | D9K54_14805 | Not Available | Positive | 2969197 - 2969457 | 9896.72 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





