Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein trau | D9K54_14660 | Not Available | Positive | 2944305 - 2945297 | 36770.5 |
| type-f conjugative transfer system pilin assembly protein trbc | D9K54_14665 | Not Available | Positive | 2945306 - 2945944 | 23437.3 |
| type-f conjugative transfer system mating-pair stabilization protein tran | D9K54_14670 | Not Available | Positive | 2945941 - 2947749 | 65691.1 |
| conjugal transfer protein trbe | D9K54_14675 | Not Available | Positive | 2947776 - 2948033 | 9779.94 |
| type-f conjugative transfer system pilin assembly protein traf | D9K54_14680 | Not Available | Positive | 2948026 - 2948769 | 28008.6 |
| protein trba | D9K54_14685 | Not Available | Positive | 2948785 - 2949132 | 12927.4 |
| toxin arta | D9K54_14690 | Not Available | Negative | 2949134 - 2949448 | 12115.1 |
| protein traq | D9K54_14695 | Not Available | Positive | 2949529 - 2949813 | 10866.4 |
| protein trbb | D9K54_14700 | Not Available | Positive | 2949800 - 2950345 | 19733.8 |
| conjugal transfer protein trbj | D9K54_14705 | Not Available | Positive | 2950275 - 2950616 | 12587.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





