Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_14555 | Not Available | Positive | 2930355 - 2930585 | 7990.79 |
| hypothetical protein | D9K54_14565 | Not Available | Positive | 2931056 - 2931343 | 11007.2 |
| duf945 domain-containing protein | D9K54_14570 | Not Available | Positive | 2931353 - 2932282 | 35676.7 |
| lytic transglycosylase | D9K54_14575 | Not Available | Negative | 2932579 - 2933181 | 22837.8 |
| relaxosome protein tram | D9K54_14580 | Not Available | Positive | 2933407 - 2933790 | 14518.3 |
| protein traj | D9K54_14585 | Not Available | Positive | 2933977 - 2934666 | 27063.2 |
| relaxosome protein tray | D9K54_14590 | Not Available | Positive | 2934765 - 2935160 | 15184.2 |
| pilin | D9K54_14595 | Not Available | Positive | 2935193 - 2935558 | 12769.3 |
| type iv conjugative transfer system protein tral | D9K54_14600 | Not Available | Positive | 2935573 - 2935884 | 11904.7 |
| protein trae | D9K54_14605 | Not Available | Positive | 2935906 - 2936472 | 21225.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





