Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine utilization protein eute | D9K54_14450 | Not Available | Positive | 2911656 - 2912318 | 25705.2 |
| heat repeat domain-containing protein | D9K54_14455 | Not Available | Negative | 2912390 - 2912599 | 7750.59 |
| hypothetical protein | D9K54_14460 | Not Available | Positive | 2913766 - 2914017 | 9297.11 |
| protein pnda | D9K54_14465 | Not Available | Negative | 2914089 - 2914241 | 5775.51 |
| hypothetical protein | D9K54_14470 | Not Available | Positive | 2914514 - 2915500 | 37630.4 |
| conjugal transfer protein trba | D9K54_14475 | Not Available | Positive | 2915718 - 2916926 | 46049.1 |
| dsbc family protein | D9K54_14480 | Not Available | Positive | 2916945 - 2918015 | 39585.5 |
| conjugal transfer protein trbc | D9K54_14485 | Not Available | Positive | 2918008 - 2920299 | 86962.0 |
| relaxase nikb | D9K54_14490 | Not Available | Negative | 2920336 - 2923035 | 103901.0 |
| nika protein | D9K54_14495 | Not Available | Negative | 2923046 - 2923378 | 12614.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





