Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_14200 | Not Available | Positive | 2862856 - 2863107 | 8960.81 |
| choline dehydrogenase | D9K54_14205 | Not Available | Negative | 2863109 - 2864797 | 62567.9 |
| betaine-aldehyde dehydrogenase | D9K54_14210 | Not Available | Negative | 2864811 - 2866283 | 52932.2 |
| transcriptional regulator | D9K54_14215 | Not Available | Negative | 2866297 - 2866884 | 21800.4 |
| choline bcct transporter bett | D9K54_14220 | Not Available | Positive | 2867013 - 2869046 | 75846.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | D9K54_14225 | Not Available | Positive | 2869619 - 2873602 | 140818.0 |
| eal domain-containing protein | D9K54_14230 | Not Available | Positive | 2873744 - 2874832 | 40606.3 |
| lysr family transcriptional regulator | D9K54_14235 | Not Available | Negative | 2874874 - 2875806 | 34772.9 |
| duf1097 domain-containing protein | D9K54_14240 | Not Available | Negative | 2875898 - 2876395 | 17296.0 |
| transcriptional regulator | D9K54_14245 | Not Available | Positive | 2876653 - 2877258 | 21688.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





