Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate-protein phosphotransferase ptsp | D9K54_13800 | Not Available | Negative | 2791648 - 2793894 | 83748.8 |
| rna pyrophosphohydrolase | D9K54_13805 | Not Available | Negative | 2793907 - 2794437 | 20796.0 |
| hypothetical protein | D9K54_13810 | Not Available | Positive | 2794749 - 2794943 | 6759.1 |
| dna mismatch repair endonuclease muth | D9K54_13815 | Not Available | Positive | 2795122 - 2795811 | 25500.9 |
| terc family protein | D9K54_13820 | Not Available | Positive | 2795880 - 2796593 | 26159.0 |
| ygdi/ygdr family lipoprotein | D9K54_13825 | Not Available | Positive | 2796731 - 2796949 | 7877.35 |
| protein tas | D9K54_13830 | Not Available | Positive | 2797057 - 2798097 | 38501.7 |
| lysophospholipid transporter lplt | D9K54_13835 | Not Available | Negative | 2798129 - 2799322 | 41573.0 |
| bifunctional acyl-acp--phospholipid o-acyltransferase/long-chain-fatty-acid--acp ligase | D9K54_13840 | Not Available | Negative | 2799315 - 2801474 | 80744.8 |
| hth-type transcriptional regulator galr | D9K54_13845 | Not Available | Positive | 2802060 - 2803091 | 37122.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





