Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygdi/ygdr family lipoprotein | D9K54_13700 | Not Available | Negative | 2768376 - 2768603 | 8174.67 |
| cysteine desulfurase csda | D9K54_13705 | Not Available | Positive | 2768795 - 2770000 | 43264.6 |
| sulfur acceptor protein csde | D9K54_13710 | Not Available | Positive | 2770000 - 2770443 | 15927.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | D9K54_13715 | Not Available | Negative | 2770494 - 2771300 | 28563.6 |
| murein transglycosylase a | D9K54_13720 | Not Available | Negative | 2771539 - 2772636 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 2772845 - 2772921 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2772955 - 2773031 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2773065 - 2773141 | Not Available |
| n-acetylmuramoyl-l-alanine amidase | D9K54_13740 | Not Available | Negative | 2773216 - 2774469 | 45637.1 |
| n-acetylglutamate synthase | D9K54_13745 | Not Available | Positive | 2774702 - 2776033 | 49228.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





