Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase/endonuclease cas3 | D9K54_13445 | Not Available | Negative | 2707374 - 2710040 | 100899.0 |
| phosphoadenosine phosphosulfate reductase | D9K54_13455 | Not Available | Negative | 2710398 - 2711132 | 27976.4 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | D9K54_13460 | Not Available | Negative | 2711206 - 2712918 | 63962.9 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | D9K54_13465 | Not Available | Negative | 2712918 - 2714717 | 66350.4 |
| 6-carboxytetrahydropterin synthase qued | D9K54_13470 | Not Available | Positive | 2715033 - 2715398 | 13773.6 |
| fad-dependent oxidoreductase | D9K54_13475 | Not Available | Positive | 2715476 - 2716747 | 46294.7 |
| ferredoxin family protein | D9K54_13480 | Not Available | Positive | 2716738 - 2716998 | 9635.44 |
| glycerol-3-phosphate responsive antiterminator | D9K54_13485 | Not Available | Positive | 2717015 - 2717590 | 20777.6 |
| electron transfer flavoprotein subunit alpha/fixb family protein | D9K54_13490 | Not Available | Negative | 2717738 - 2718598 | 30311.4 |
| electron transfer flavoprotein subunit beta/fixa family protein | D9K54_13495 | Not Available | Negative | 2718595 - 2719374 | 28654.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





