Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator hosa | D9K54_13340 | Not Available | Positive | 2688918 - 2689325 | 15479.8 |
| rna polymerase sigma factor rpos | D9K54_13345 | Not Available | Negative | 2689445 - 2690437 | 37975.1 |
| murein hydrolase activator nlpd | D9K54_13350 | Not Available | Negative | 2690500 - 2691639 | 40151.3 |
| protein-l-isoaspartate o-methyltransferase | D9K54_13355 | Not Available | Negative | 2691779 - 2692405 | 23259.2 |
| 5'/3'-nucleotidase sure | D9K54_13360 | Not Available | Negative | 2692399 - 2693160 | 26902.0 |
| trna pseudouridine(13) synthase trud | D9K54_13365 | Not Available | Negative | 2693141 - 2694190 | 39078.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | D9K54_13370 | Not Available | Negative | 2694187 - 2694666 | 16898.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | D9K54_13375 | Not Available | Negative | 2694666 - 2695376 | 25738.7 |
| cell division protein ftsb | D9K54_13380 | Not Available | Negative | 2695395 - 2695706 | 11622.7 |
| duf3561 family protein | D9K54_13385 | Not Available | Negative | 2695900 - 2696223 | 12050.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





