Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitric oxide reductase transcriptional regulator norr | D9K54_13190 | Not Available | Negative | 2656822 - 2658336 | 55356.8 |
| anaerobic nitric oxide reductase flavorubredoxin | D9K54_13195 | Not Available | Positive | 2658523 - 2659962 | 54238.0 |
| nitric oxide reductase flrd-nad+ reductase | D9K54_13200 | Not Available | Positive | 2659959 - 2661092 | 41334.1 |
| carbamoyltransferase hypf | D9K54_13205 | Not Available | Negative | 2661220 - 2663472 | 81760.2 |
| electron transporter hydn | D9K54_13210 | Not Available | Negative | 2663625 - 2664152 | 19027.2 |
| laci family dna-binding transcriptional regulator | D9K54_13215 | Not Available | Negative | 2664301 - 2665314 | 36990.7 |
| pts cellobiose/arbutin/salicin transporter subunit iibc | D9K54_13220 | Not Available | Positive | 2665571 - 2667028 | 51130.2 |
| 6-phospho-beta-glucosidase | D9K54_13225 | Not Available | Positive | 2667037 - 2668461 | 53802.6 |
| hydrogenase 3 maturation endopeptidase hyci | D9K54_13230 | Not Available | Negative | 2668620 - 2669090 | 17057.6 |
| formate hydrogenlyase maturation protein hych | D9K54_13235 | Not Available | Negative | 2669083 - 2669493 | 15451.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





