Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | D9K54_13090 | Not Available | Negative | 2642382 - 2642810 | 15590.6 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | D9K54_13095 | Not Available | Negative | 2642807 - 2643373 | 20800.1 |
| Trna-arg | Not Available | Not Available | Positive | 2643654 - 2643730 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2643929 - 2644005 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2644068 - 2644144 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2644344 - 2644420 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2644424 - 2644516 | Not Available |
| carbon storage regulator | D9K54_13125 | Not Available | Negative | 2644833 - 2645018 | 6856.34 |
| alanine--trna ligase | D9K54_13130 | Not Available | Negative | 2645253 - 2647883 | 96007.8 |
| recombination regulator recx | D9K54_13135 | Not Available | Negative | 2648011 - 2648511 | 19459.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





