Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6 family transposase | D9K54_12885 | Not Available | Positive | 2604012 - 2604091 | 2852.44 |
| transcriptional regulator | D9K54_12890 | Not Available | Positive | 2604193 - 2604672 | 17421.2 |
| multidrug efflux rnd transporter permease subunit oqxb | D9K54_12895 | Not Available | Negative | 2604742 - 2607894 | 113383.0 |
| multidrug efflux rnd transporter periplasmic adaptor subunit oqxa | D9K54_12900 | Not Available | Negative | 2607918 - 2609093 | 42397.4 |
| mercury transporter merc | D9K54_12905 | Not Available | Negative | 2609481 - 2609868 | 13784.2 |
| mercury resistance system periplasmic binding protein merp | D9K54_12910 | Not Available | Negative | 2609904 - 2610179 | 9414.52 |
| mercuric ion transporter mert | D9K54_12915 | Not Available | Negative | 2610193 - 2610543 | 12521.8 |
| mercuric resistance operon regulatory protein | D9K54_12920 | Not Available | Positive | 2610615 - 2611049 | 15906.2 |
| rop family plasmid primer rna-binding protein | D9K54_12930 | Not Available | Negative | 2611769 - 2611848 | 2863.16 |
| hypothetical protein | D9K54_12935 | Not Available | Positive | 2612260 - 2614512 | 85223.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





