Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_12710 | Not Available | Negative | 2572849 - 2573130 | 11110.2 |
| colicin b immunity protein | D9K54_12720 | Not Available | Negative | 2573488 - 2574015 | 20130.5 |
| lipid ii-degrading bacteriocin colicin m | D9K54_12730 | Not Available | Positive | 2574259 - 2575074 | 29486.2 |
| colicin m immunity protein | D9K54_12735 | Not Available | Negative | 2575124 - 2575477 | 13776.5 |
| phage integrase family protein | D9K54_12740 | Not Available | Negative | 2575655 - 2576446 | 29201.8 |
| hypothetical protein | D9K54_12745 | Not Available | Negative | 2576443 - 2577132 | 25226.4 |
| hypothetical protein | D9K54_12750 | Not Available | Negative | 2577176 - 2577526 | 13392.6 |
| hypothetical protein | D9K54_12755 | Not Available | Negative | 2578058 - 2581879 | 144545.0 |
| hypothetical protein | D9K54_12760 | Not Available | Negative | 2582302 - 2582649 | 13360.8 |
| colicin 1b immunity protein | D9K54_12765 | Not Available | Positive | 2582768 - 2583115 | 13219.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





