Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | D9K54_12660 | Not Available | Negative | 2566932 - 2567486 | 20246.3 |
| divalent-cation tolerance protein cuta | D9K54_12665 | Not Available | Positive | 2568276 - 2568605 | 11991.6 |
| twin-arginine translocation (tat) pathway signal sequence domain protein | D9K54_12670 | Not Available | Positive | 2568610 - 2569641 | 37554.7 |
| phosphoribosylanthranilate isomerase | D9K54_12675 | Not Available | Negative | 2569652 - 2570290 | 21487.8 |
| bleomycin binding protein ble-mbl | D9K54_12680 | Not Available | Negative | 2570295 - 2570660 | 13440.0 |
| subclass b1 metallo-beta-lactamase ndm-9 | D9K54_12685 | Not Available | Negative | 2570664 - 2571476 | 28500.2 |
| hypothetical protein | D9K54_12690 | Not Available | Negative | 2571577 - 2571780 | 7523.02 |
| is1 family transposase | D9K54_12695 | Not Available | Positive | 2571839 - 2571957 | 4500.51 |
| hypothetical protein | D9K54_12700 | Not Available | Negative | 2571968 - 2572171 | 6511.67 |
| hypothetical protein | D9K54_12705 | Not Available | Positive | 2572267 - 2572542 | 10241.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





