Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | D9K54_12560 | Not Available | Positive | 2553988 - 2554104 | 4364.59 |
| 30s ribosomal protein s13 | D9K54_12565 | Not Available | Positive | 2554251 - 2554607 | 13100.2 |
| 30s ribosomal protein s11 | D9K54_12570 | Not Available | Positive | 2554624 - 2555013 | 13845.7 |
| 30s ribosomal protein s4 | D9K54_12575 | Not Available | Positive | 2555047 - 2555667 | 23470.5 |
| dna-directed rna polymerase subunit alpha | D9K54_12580 | Not Available | Positive | 2555693 - 2556682 | 36513.9 |
| 50s ribosomal protein l17 | D9K54_12585 | Not Available | Positive | 2556723 - 2557106 | 14365.4 |
| duf1992 domain-containing protein | D9K54_12590 | Not Available | Positive | 2557213 - 2557581 | 13973.6 |
| heavy metal-responsive transcriptional regulator | D9K54_12595 | Not Available | Positive | 2557592 - 2558017 | 16180.4 |
| alternative ribosome-rescue factor a | D9K54_12600 | Not Available | Positive | 2558073 - 2558291 | 8171.86 |
| large-conductance mechanosensitive channel protein mscl | D9K54_12605 | Not Available | Negative | 2558288 - 2558698 | 14927.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





