Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | Positive | 57414 - 57597 | Not Available |
| protein tolr | D9K54_00310 | Not Available | Negative | 57179 - 57607 | 15383.9 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 58050 - 58426 | Not Available |
| protein tolq | D9K54_00315 | Not Available | Negative | 57611 - 58303 | 25599.2 |
| acyl-coa thioester hydrolase ybgc | D9K54_00320 | Not Available | Negative | 58300 - 58704 | 15562.9 |
| cyd operon protein ybge | D9K54_00325 | Not Available | Negative | 58854 - 59147 | 10933.0 |
| cytochrome bd-i oxidase subunit cydx | D9K54_00330 | Not Available | Negative | 59147 - 59260 | 4041.9 |
| cytochrome bd-i ubiquinol oxidase subunit 2 | D9K54_00335 | Not Available | Negative | 59275 - 60414 | 42455.6 |
| cytochrome bd-i ubiquinol oxidase subunit 1 | D9K54_00340 | Not Available | Negative | 60430 - 61998 | 58208.4 |
| hypothetical protein | D9K54_00345 | Not Available | Positive | 62804 - 63748 | 36396.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





