Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | D9K54_12410 | Not Available | Positive | 2536794 - 2537524 | 26641.8 |
| is21-like element isec12 family transposase | D9K54_12415 | Not Available | Positive | 2537719 - 2539260 | 59358.6 |
| atp-binding protein | D9K54_12420 | Not Available | Positive | 2539275 - 2540021 | 28348.2 |
| aspartate ammonia-lyase | D9K54_12425 | Not Available | Negative | 2540107 - 2541467 | 49450.6 |
| elongation factor tu | D9K54_12430 | Not Available | Positive | 2541468 - 2541683 | 7740.56 |
| bacterioferritin-associated ferredoxin | D9K54_12435 | Not Available | Positive | 2541866 - 2542060 | 7475.27 |
| bacterioferritin | D9K54_12440 | Not Available | Positive | 2542133 - 2542609 | 18353.1 |
| prepilin peptidase | D9K54_12445 | Not Available | Negative | 2542606 - 2543073 | 16952.0 |
| 30s ribosomal protein s10 | D9K54_12450 | Not Available | Positive | 2543452 - 2543763 | 11736.3 |
| 50s ribosomal protein l3 | D9K54_12455 | Not Available | Positive | 2543796 - 2544425 | 22244.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





