Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_12280 | Not Available | Positive | 2520336 - 2520572 | 8820.41 |
| hypothetical protein | D9K54_12285 | Not Available | Negative | 2520540 - 2520863 | 12219.8 |
| hypothetical protein | D9K54_12290 | Not Available | Negative | 2521290 - 2521490 | 7414.29 |
| inovirus gp2 family protein | D9K54_12295 | Not Available | Positive | 2521690 - 2522259 | 21842.2 |
| hypothetical protein | D9K54_12300 | Not Available | Positive | 2522519 - 2522920 | 15549.2 |
| hypothetical protein | D9K54_12305 | Not Available | Positive | 2522908 - 2523318 | 15619.7 |
| phosphotriesterase | D9K54_12320 | Not Available | Negative | 2525633 - 2526667 | 37796.3 |
| dmt family transporter | D9K54_12325 | Not Available | Negative | 2526670 - 2527635 | 34231.2 |
| cytoplasmic protein | D9K54_12330 | Not Available | Negative | 2527692 - 2528450 | 28395.0 |
| deor family transcriptional regulator | D9K54_12335 | Not Available | Negative | 2528464 - 2529678 | 43667.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





