Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | D9K54_12170 | Not Available | Negative | 2500128 - 2504351 | 155155.0 |
| dna-directed rna polymerase subunit beta | D9K54_12175 | Not Available | Negative | 2504428 - 2508456 | 150641.0 |
| 50s ribosomal protein l7/l12 | D9K54_12180 | Not Available | Negative | 2508776 - 2509141 | 12295.8 |
| 50s ribosomal protein l10 | D9K54_12185 | Not Available | Negative | 2509208 - 2509705 | 17712.6 |
| 50s ribosomal protein l1 | D9K54_12190 | Not Available | Negative | 2509997 - 2510701 | 24731.1 |
| 50s ribosomal protein l11 | D9K54_12195 | Not Available | Negative | 2510705 - 2511133 | 14876.2 |
| transcription termination/antitermination protein nusg | D9K54_12200 | Not Available | Negative | 2511292 - 2511837 | 20532.7 |
| protein translocase subunit sece | D9K54_12205 | Not Available | Negative | 2511839 - 2512222 | 13644.3 |
| elongation factor tu | D9K54_12210 | Not Available | Negative | 2512452 - 2512667 | 7770.58 |
| gtpase rsga | D9K54_12215 | Not Available | Negative | 2512786 - 2513187 | 14706.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





