Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | D9K54_12120 | Not Available | Negative | 2490921 - 2491985 | 39308.4 |
| nad(+) diphosphatase | D9K54_12125 | Not Available | Negative | 2492025 - 2492798 | 29690.6 |
| sigma d regulator | D9K54_12130 | Not Available | Positive | 2492893 - 2493369 | 18243.9 |
| phosphomethylpyrimidine synthase | D9K54_12135 | Not Available | Positive | 2493602 - 2495497 | 70873.5 |
| thiamine phosphate synthase | D9K54_12140 | Not Available | Positive | 2495497 - 2496132 | 23072.7 |
| thiazole biosynthesis adenylyltransferase thif | D9K54_12145 | Not Available | Positive | 2496125 - 2496880 | 26952.3 |
| sulfur carrier protein this | D9K54_12150 | Not Available | Positive | 2496864 - 2497064 | 7367.83 |
| thiazole synthase | D9K54_12155 | Not Available | Positive | 2497066 - 2497836 | 26854.6 |
| 2-iminoacetate synthase thih | D9K54_12160 | Not Available | Positive | 2497833 - 2498966 | 43307.6 |
| stationary phase growth adaptation protein | D9K54_12165 | Not Available | Negative | 2499376 - 2499915 | 21079.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





