Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline transporter | D9K54_11945 | Not Available | Positive | 2460857 - 2461015 | 6088.06 |
| duf2254 domain-containing protein | D9K54_11950 | Not Available | Positive | 2460960 - 2461658 | 25799.3 |
| is1 family transposase | D9K54_11955 | Not Available | Positive | 2461692 - 2461770 | 2485.91 |
| nuclease | D9K54_11960 | Not Available | Positive | 2461771 - 2462861 | 40954.9 |
| is1 family transposase | D9K54_11965 | Not Available | Negative | 2462862 - 2462940 | 2485.91 |
| hemolysin/hemagglutinin-like domain protein | D9K54_11970 | Not Available | Negative | 2462974 - 2463144 | 6344.52 |
| arac family transcriptional regulator | D9K54_11975 | Not Available | Positive | 2463152 - 2463535 | 14775.9 |
| nad-dependent malic enzyme | D9K54_11980 | Not Available | Negative | 2463652 - 2465346 | 62263.0 |
| transporter | D9K54_11985 | Not Available | Negative | 2465434 - 2466810 | 48502.4 |
| murr/rpir family transcriptional regulator | D9K54_11990 | Not Available | Positive | 2467094 - 2467981 | 33970.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





