Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_11890 | Not Available | Positive | 2442826 - 2443209 | 14827.3 |
| hypothetical protein | D9K54_11895 | Not Available | Positive | 2443206 - 2443631 | 15572.8 |
| protease lon-related brex system protein brxl | D9K54_11905 | Not Available | Negative | 2443896 - 2445980 | 77405.3 |
| brex-1 system phosphatase pglz type a | D9K54_11910 | Not Available | Negative | 2445991 - 2448588 | 100140.0 |
| brex-1 system adenine-specific dna-methyltransferase pglx | D9K54_11915 | Not Available | Negative | 2448765 - 2452436 | 140860.0 |
| brex system p-loop protein brxc | D9K54_11920 | Not Available | Negative | 2452482 - 2456123 | 139310.0 |
| duf1788 domain-containing protein | D9K54_11925 | Not Available | Negative | 2456135 - 2456737 | 22846.7 |
| duf1819 family protein | D9K54_11930 | Not Available | Negative | 2456734 - 2457336 | 22559.1 |
| hypothetical protein | D9K54_11935 | Not Available | Positive | 2457633 - 2458631 | 38849.5 |
| bcct family transporter | D9K54_11940 | Not Available | Positive | 2458915 - 2460912 | 73715.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





