Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid mobilization relaxosome protein mobc | D9K54_11835 | Not Available | Negative | 2435137 - 2435435 | 11158.8 |
| rop family plasmid primer rna-binding protein | D9K54_11840 | Not Available | Positive | 2435499 - 2435690 | 7215.34 |
| nuclease | D9K54_11845 | Not Available | Positive | 2435980 - 2437136 | 43643.3 |
| hypothetical protein | D9K54_11855 | Not Available | Positive | 2438071 - 2438364 | 10745.7 |
| hypothetical protein | D9K54_11860 | Not Available | Negative | 2438366 - 2438938 | 22172.1 |
| alpa family transcriptional regulator | D9K54_11865 | Not Available | Negative | 2439024 - 2439230 | 7814.51 |
| hypothetical protein | D9K54_11870 | Not Available | Negative | 2439613 - 2440404 | 30502.9 |
| hemolysin expression modulator hha | D9K54_11875 | Not Available | Positive | 2441401 - 2441613 | 8407.11 |
| inovirus gp2 family protein | D9K54_11880 | Not Available | Positive | 2441845 - 2442444 | 23202.9 |
| hypothetical protein | D9K54_11885 | Not Available | Positive | 2442359 - 2442547 | 6768.32 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





