Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is91 family transposase | D9K54_11720 | Not Available | Positive | 2412814 - 2413583 | 29391.2 |
| is1 family transposase | D9K54_11725 | Not Available | Positive | 2413755 - 2413872 | 4500.51 |
| hypothetical protein | D9K54_11730 | Not Available | Positive | 2413869 - 2414822 | 37421.0 |
| duf4102 domain-containing protein | D9K54_11735 | Not Available | Positive | 2415189 - 2416397 | 45722.2 |
| duf3987 domain-containing protein | D9K54_11740 | Not Available | Negative | 2416621 - 2418186 | 59340.6 |
| alpa family transcriptional regulator | D9K54_11745 | Not Available | Negative | 2418202 - 2418450 | 9321.18 |
| hypothetical protein | D9K54_11750 | Not Available | Positive | 2418551 - 2420374 | 72141.5 |
| hypothetical protein | D9K54_11755 | Not Available | Negative | 2421107 - 2421292 | 6888.4 |
| inovirus gp2 family protein | D9K54_11760 | Not Available | Positive | 2421584 - 2422147 | 22256.6 |
| is66 family insertion sequence hypothetical protein | D9K54_11770 | Not Available | Negative | 2423171 - 2423536 | 13405.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





