Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | D9K54_11670 | Not Available | Positive | 2406091 - 2406813 | 26822.1 |
| sulfurtransferase complex subunit tusd | D9K54_11675 | Not Available | Positive | 2406813 - 2407199 | 13653.1 |
| sulfurtransferase complex subunit tusc | D9K54_11680 | Not Available | Positive | 2407199 - 2407558 | 13035.7 |
| sulfurtransferase complex subunit tusb | D9K54_11685 | Not Available | Positive | 2407566 - 2407853 | 10692.9 |
| 30s ribosomal protein s12 | D9K54_11690 | Not Available | Positive | 2407979 - 2408353 | 13737.9 |
| 30s ribosomal protein s7 | D9K54_11695 | Not Available | Positive | 2408450 - 2408920 | 17605.4 |
| elongation factor g | D9K54_11700 | Not Available | Positive | 2409017 - 2411131 | 77585.8 |
| elongation factor tu | D9K54_11705 | Not Available | Positive | 2411202 - 2411932 | 26641.8 |
| hypothetical protein | D9K54_11710 | Not Available | Positive | 2412052 - 2412240 | 6943.65 |
| transposase | D9K54_11715 | Not Available | Positive | 2412250 - 2412813 | 21277.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





