Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase/penicillin-binding protein 1a | D9K54_11420 | Not Available | Negative | 2357127 - 2359679 | 93628.4 |
| dna utilization protein hofm | D9K54_11425 | Not Available | Positive | 2359799 - 2360578 | 29064.0 |
| dna utilization protein hofn | D9K54_11430 | Not Available | Positive | 2360578 - 2361117 | 20853.2 |
| dna utilization protein hofo | D9K54_11435 | Not Available | Positive | 2361101 - 2361541 | 16957.3 |
| duf2531 family protein | D9K54_11440 | Not Available | Positive | 2361531 - 2361935 | 15071.0 |
| dna transporter hofq | D9K54_11445 | Not Available | Positive | 2361847 - 2363085 | 44776.9 |
| shikimate kinase | D9K54_11450 | Not Available | Positive | 2363486 - 2364007 | 19539.2 |
| 3-dehydroquinate synthase | D9K54_11455 | Not Available | Positive | 2364064 - 2365152 | 38865.3 |
| cell division protein damx | D9K54_11460 | Not Available | Positive | 2365244 - 2366530 | 46066.1 |
| dna adenine methylase | D9K54_11465 | Not Available | Positive | 2366637 - 2367473 | 32101.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





