Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greb | D9K54_11370 | Not Available | Negative | 2345190 - 2345702 | 19958.9 |
| dna-binding response regulator | D9K54_11375 | Not Available | Positive | 2345894 - 2346613 | 27355.3 |
| two-component sensor histidine kinase | D9K54_11380 | Not Available | Positive | 2346610 - 2347962 | 50337.1 |
| phosphoenolpyruvate carboxykinase (atp) | D9K54_11385 | Not Available | Negative | 2348039 - 2349661 | 59646.7 |
| duf4153 domain-containing protein | D9K54_11390 | Not Available | Positive | 2350040 - 2351764 | 64519.9 |
| hsp33 family molecular chaperone hslo | D9K54_11395 | Not Available | Negative | 2351899 - 2352777 | 32536.3 |
| ribosome-associated heat shock protein hsp15 | D9K54_11400 | Not Available | Negative | 2352802 - 2353203 | 15514.8 |
| gmp/imp nucleotidase | D9K54_11405 | Not Available | Negative | 2353214 - 2353882 | 25400.2 |
| intracellular growth attenuator protein igaa | D9K54_11410 | Not Available | Negative | 2353947 - 2356082 | 79461.4 |
| adp compounds hydrolase nude | D9K54_11415 | Not Available | Positive | 2356402 - 2356962 | 21154.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





