Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-alpha-glucanotransferase | D9K54_11320 | Not Available | Positive | 2332493 - 2334577 | 78520.7 |
| gluconate transporter | D9K54_11325 | Not Available | Negative | 2334622 - 2335938 | 45969.6 |
| fe-s biogenesis protein nfua | D9K54_11330 | Not Available | Negative | 2336298 - 2336873 | 20998.9 |
| dna utilization protein gntx | D9K54_11335 | Not Available | Negative | 2336932 - 2337615 | 25787.8 |
| pimeloyl-acp methyl ester esterase bioh | D9K54_11340 | Not Available | Positive | 2337653 - 2338423 | 28534.7 |
| recombination-promoting nuclease rpna | D9K54_11345 | Not Available | Negative | 2338452 - 2339330 | 33285.4 |
| ferrous iron transporter c | D9K54_11350 | Not Available | Negative | 2339533 - 2339769 | 8660.66 |
| ferrous iron transporter b | D9K54_11355 | Not Available | Negative | 2339769 - 2342090 | 84434.6 |
| ferrous iron transporter a | D9K54_11360 | Not Available | Negative | 2342107 - 2342334 | 8371.31 |
| rna-binding transcriptional accessory protein | D9K54_11365 | Not Available | Negative | 2342772 - 2345093 | 85076.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





