Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-processing protein dpra | D9K54_11220 | Not Available | Positive | 2302704 - 2303999 | 47058.5 |
| naat family transporter yhgn | D9K54_11225 | Not Available | Negative | 2304045 - 2304638 | 21491.9 |
| aspartate-semialdehyde dehydrogenase | D9K54_11230 | Not Available | Positive | 2304830 - 2305933 | 40020.2 |
| glycogen-branching enzyme | D9K54_11235 | Not Available | Positive | 2306206 - 2308392 | 84389.5 |
| glycogen debranching protein glgx | D9K54_11240 | Not Available | Positive | 2308389 - 2310362 | 73688.7 |
| glucose-1-phosphate adenylyltransferase | D9K54_11245 | Not Available | Positive | 2310380 - 2311675 | 48700.4 |
| glycogen synthase glga | D9K54_11250 | Not Available | Positive | 2311675 - 2313108 | 52825.4 |
| glycogen phosphorylase | D9K54_11255 | Not Available | Positive | 2313127 - 2315574 | 93177.7 |
| psts family phosphate abc transporter substrate-binding protein | D9K54_11260 | Not Available | Positive | 2315700 - 2317208 | 56599.9 |
| psts family phosphate abc transporter substrate-binding protein | D9K54_11265 | Not Available | Positive | 2317234 - 2318226 | 37123.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





