Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltransferase | D9K54_11170 | Not Available | Positive | 2291064 - 2292797 | 61613.2 |
| hypothetical protein | D9K54_11175 | Not Available | Positive | 2293166 - 2293582 | 15933.2 |
| duf4225 domain-containing protein | D9K54_11180 | Not Available | Negative | 2293595 - 2294443 | 32261.7 |
| n-acetyltransferase | D9K54_11185 | Not Available | Negative | 2294654 - 2295142 | 18764.6 |
| oxidoreductase | D9K54_11190 | Not Available | Positive | 2295477 - 2296514 | 38767.1 |
| quercetin 2,3-dioxygenase | D9K54_11195 | Not Available | Positive | 2296637 - 2297332 | 26280.8 |
| hth-type transcriptional regulator gntr | D9K54_11200 | Not Available | Positive | 2297556 - 2298551 | 36437.3 |
| gluconokinase | D9K54_11205 | Not Available | Positive | 2298690 - 2299217 | 19544.4 |
| low-affinity gluconate transporter | D9K54_11210 | Not Available | Positive | 2299221 - 2300561 | 46418.9 |
| recq family atp-dependent dna helicase | D9K54_11215 | Not Available | Positive | 2300701 - 2302797 | 77473.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





