Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter permease livm | D9K54_11120 | Not Available | Positive | 2281581 - 2282858 | 46306.2 |
| abc transporter atp-binding protein | D9K54_11125 | Not Available | Positive | 2282855 - 2283622 | 28428.7 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | D9K54_11130 | Not Available | Positive | 2283624 - 2284337 | 26239.8 |
| hypothetical protein | D9K54_11135 | Not Available | Positive | 2284456 - 2285202 | 28920.8 |
| sn-glycerol-3-phosphate-binding periplasmic protein ugpb | D9K54_11140 | Not Available | Positive | 2285562 - 2286878 | 48467.2 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | D9K54_11145 | Not Available | Positive | 2286976 - 2287863 | 33205.6 |
| sn-glycerol 3-phosphate abc transporter permease | D9K54_11150 | Not Available | Positive | 2287860 - 2288705 | 31455.5 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | D9K54_11155 | Not Available | Positive | 2288707 - 2289777 | 39478.2 |
| glycerophosphodiester phosphodiesterase | D9K54_11160 | Not Available | Positive | 2289774 - 2290517 | 27334.0 |
| duf2756 family protein | D9K54_11165 | Not Available | Negative | 2290504 - 2290944 | 16594.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





