Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1145 family protein | D9K54_11070 | Not Available | Negative | 2271798 - 2272067 | 10280.4 |
| ribosomal rna small subunit methyltransferase d | D9K54_11075 | Not Available | Negative | 2272057 - 2272653 | 21678.8 |
| signal recognition particle-docking protein ftsy | D9K54_11080 | Not Available | Positive | 2272803 - 2274299 | 54614.4 |
| cell division atp-binding protein ftse | D9K54_11085 | Not Available | Positive | 2274302 - 2274970 | 24440.8 |
| cell division protein ftsx | D9K54_11090 | Not Available | Positive | 2274963 - 2276021 | 38545.9 |
| rna polymerase sigma factor rpoh | D9K54_11095 | Not Available | Positive | 2276266 - 2277120 | 32470.6 |
| branched-chain amino acid abc transporter substrate-binding protein | D9K54_11100 | Not Available | Positive | 2277391 - 2278494 | 39020.5 |
| aspartate 1-decarboxylase autocleavage activator panm | D9K54_11105 | Not Available | Negative | 2278694 - 2279077 | 14587.5 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | D9K54_11110 | Not Available | Positive | 2279501 - 2280610 | 39376.9 |
| high-affinity branched-chain amino acid abc transporter permease livh | D9K54_11115 | Not Available | Positive | 2280658 - 2281584 | 32984.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





