Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low-affinity inorganic phosphate transporter 1 | D9K54_10820 | Not Available | Negative | 2222672 - 2224171 | 53392.4 |
| nad(p)/fad-dependent oxidoreductase | D9K54_10825 | Not Available | Positive | 2224403 - 2225605 | 43801.6 |
| duf2776 domain-containing protein | D9K54_10830 | Not Available | Negative | 2225922 - 2226974 | 37659.3 |
| duf4049 domain-containing protein | D9K54_10835 | Not Available | Positive | 2227357 - 2228967 | 61997.5 |
| duf4049 domain-containing protein | D9K54_10840 | Not Available | Positive | 2229229 - 2230851 | 61081.7 |
| hlyd family secretion protein | D9K54_10845 | Not Available | Positive | 2231217 - 2232284 | 38858.6 |
| abc transporter atp-binding protein/permease | D9K54_10850 | Not Available | Positive | 2232281 - 2235016 | 100761.0 |
| abc transporter permease | D9K54_10855 | Not Available | Positive | 2235016 - 2236140 | 40997.1 |
| type ii toxin-antitoxin system hica family toxin | D9K54_10860 | Not Available | Positive | 2236213 - 2236488 | 10186.5 |
| type ii toxin-antitoxin system hicb family antitoxin | D9K54_10865 | Not Available | Positive | 2236485 - 2236844 | 13403.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





