Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | D9K54_10765 | Not Available | Negative | 2213104 - 2213457 | 13340.4 |
| hypothetical protein | D9K54_10770 | Not Available | Positive | 2213722 - 2213907 | 6796.29 |
| damage inducible protein | D9K54_10775 | Not Available | Positive | 2214198 - 2214281 | 3021.06 |
| glutathione-disulfide reductase | D9K54_10780 | Not Available | Negative | 2214335 - 2215687 | 48741.3 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | D9K54_10785 | Not Available | Negative | 2215759 - 2216601 | 31972.5 |
| oligopeptidase a | D9K54_10790 | Not Available | Positive | 2216804 - 2218846 | 77171.3 |
| ribosomal rna small subunit methyltransferase j | D9K54_10795 | Not Available | Positive | 2218854 - 2219606 | 26950.8 |
| mfs transporter | D9K54_10800 | Not Available | Negative | 2219655 - 2221124 | 53550.4 |
| universal stress protein a | D9K54_10810 | Not Available | Negative | 2221441 - 2221875 | 16067.3 |
| universal stress protein b | D9K54_10815 | Not Available | Positive | 2222266 - 2222601 | 13028.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





