Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme utilization cystosolic carrier protein hutx | D9K54_10715 | Not Available | Negative | 2201393 - 2201887 | 18329.8 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | D9K54_10720 | Not Available | Negative | 2201900 - 2203237 | 49571.2 |
| hemin abc transporter substrate-binding protein | D9K54_10725 | Not Available | Negative | 2203257 - 2204171 | 32720.8 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | D9K54_10730 | Not Available | Positive | 2204854 - 2206836 | 72547.1 |
| hemin-degrading factor | D9K54_10735 | Not Available | Positive | 2206885 - 2207913 | 38622.8 |
| helix-turn-helix transcriptional regulator | D9K54_10740 | Not Available | Negative | 2207974 - 2208504 | 20452.5 |
| outer membrane protein slp | D9K54_10745 | Not Available | Negative | 2208660 - 2209226 | 20949.1 |
| hypothetical protein | D9K54_10750 | Not Available | Negative | 2209473 - 2210696 | 47270.6 |
| arsenate reductase (glutaredoxin) | D9K54_10755 | Not Available | Negative | 2211323 - 2211748 | 15872.3 |
| arsenic transporter | D9K54_10760 | Not Available | Negative | 2211761 - 2213050 | 45500.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





