Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate/hydroxypyruvate reductase ghrb | D9K54_10395 | Not Available | Negative | 2129402 - 2130376 | 35427.6 |
| lipoprotein | D9K54_10400 | Not Available | Negative | 2130480 - 2131139 | 22198.6 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | D9K54_10405 | Not Available | Positive | 2131292 - 2133625 | 85852.3 |
| n-acetyltransferase | D9K54_10410 | Not Available | Negative | 2133594 - 2134034 | 17149.8 |
| dna-3-methyladenine glycosylase i | D9K54_10415 | Not Available | Negative | 2134031 - 2134594 | 21083.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | D9K54_10420 | Not Available | Positive | 2134752 - 2135450 | 25962.0 |
| mfs transporter | D9K54_10425 | Not Available | Positive | 2135679 - 2136881 | 42745.1 |
| long polar fimbrial protein lpfa | D9K54_10430 | Not Available | Positive | 2137226 - 2137750 | 17970.1 |
| molecular chaperone lpfb | D9K54_10435 | Not Available | Positive | 2137815 - 2138501 | 24984.1 |
| outer membrane usher protein lpfc | D9K54_10440 | Not Available | Positive | 2138530 - 2141103 | 94004.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





