Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase | D9K54_00115 | Not Available | Negative | 23474 - 24514 | 38650.3 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | D9K54_00120 | Not Available | Positive | 24601 - 25890 | 47317.4 |
| kinase inhibitor | D9K54_00125 | Not Available | Positive | 25949 - 26425 | 17072.0 |
| putative acyl-coa thioester hydrolase | D9K54_00130 | Not Available | Positive | 26577 - 27860 | 45983.5 |
| hydratase | D9K54_00135 | Not Available | Negative | 28001 - 30262 | 81535.3 |
| anion permease | D9K54_00145 | Not Available | Negative | 30445 - 31878 | 51353.8 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 32358 - 32454 | Not Available |
| 4-oxalomesaconate tautomerase | D9K54_00150 | Not Available | Negative | 31954 - 33006 | 37075.8 |
| lysr family transcriptional regulator | D9K54_00155 | Not Available | Positive | 33190 - 34143 | 36060.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 33687 - 33802 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





