Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysis protein | D9K54_09640 | Not Available | Positive | 2005103 - 2005240 | 4796.93 |
| conjugal transfer protein | D9K54_10240 | Not Available | Positive | 2098334 - 2098988 | 25192.0 |
| hypothetical protein | D9K54_10245 | Not Available | Negative | 2099246 - 2099434 | 6859.31 |
| plasmid replication protein | D9K54_10250 | Not Available | Positive | 2099435 - 2100343 | 34357.0 |
| hypothetical protein | D9K54_10255 | Not Available | Negative | 2100282 - 2100527 | 8392.02 |
| mobilization protein | D9K54_10260 | Not Available | Negative | 2100549 - 2100824 | 10397.8 |
| conjugal transfer protein | D9K54_10265 | Not Available | Positive | 2101003 - 2102273 | 48121.3 |
| glycoside hydrolase family 127 protein | D9K54_10275 | Not Available | Negative | 2103043 - 2105013 | 75114.9 |
| mfs transporter | D9K54_10280 | Not Available | Negative | 2105024 - 2106424 | 51469.9 |
| arac family transcriptional regulator | D9K54_10285 | Not Available | Positive | 2106650 - 2107465 | 31563.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





